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001-es BibID:BIBFORM096569
035-os BibID:(cikkazonosító)113649 (WoS)000695696100030 (Scopus)85109505021
Első szerző:Kiss Mariann (vegyész)
Cím:Nanomolar inhibition of human OGA by 2-acetamido-2-deoxy-d-glucono-1,5-lactone semicarbazone derivatives / Mariann Kiss, Erna Szabó, Boglárka Bocska, Luu Thanh Sinh, Conceicao Piedade Fernandes, István Timári, Joseph M. Hayes, László Somsák, Teréz Barna
Dátum:2021
ISSN:0223-5234
Megjegyzések:O-GlcNAcylation is a dynamic post-translational modification mediated by O-linked beta-N-acetylglucosamine transferase (OGT) and O-GlcNAc hydrolase (OGA), that adds or removes a single beta-N-acetylglucosamine (GlcNAc) moiety to or from serine/threonine residues of nucleocytosolic and mitochondrial proteins, respectively. The perturbed homeostasis of O-GlcNAc cycling results in several pathological conditions. Human OGA is a promising therapeutic target in diseases where aberrantly low levels of O-GlcNAc are experienced, such as tauopathy in Alzheimer's disease. A new class of potent OGA inhibitors, 2-acetamido-2-deoxy-D-glucono-1,5-lactone (thio)semicarbazones, have been identified. Eight inhibitors were designed and synthesized in five steps starting from d-glucosamine and with 15-55% overall yields. A heterologous OGA expression protocol with strain selection and isolation has been optimized that resulted in stable, active and full length human OGA (hOGA) isomorph. Thermal denaturation kinetics of hOGA revealed environmental factors affecting hOGA stability. From kinetics experiments, the synthesized compounds proved to be efficient competitive inhibitors of hOGA with K-i-s in the range of similar to 30-250 nM and moderate selectivity with respect to lysosomal beta-hexosaminidases. In silico studies consisting of Prime protein-ligand refinements, QM/MM optimizations and QM/MM-PBSA binding free energy calculations revealed the factors governing the observed potencies, and led to design of the most potent analogue 2-acetamido-2-deoxy-D-glucono-1,5-lactone 4-(2-naphthyl)-semicarbazone 6g (K-i = 36 nM). The protocol employed has applications in future structure based inhibitor design targeting OGA. (C) 2021 The Authors. Published by Elsevier Masson SAS.
Tárgyszavak:Természettudományok Kémiai tudományok idegen nyelvű folyóiratközlemény külföldi lapban
folyóiratcikk
hOGA
Expression
Inhibitor
Glyconolactone semicarbazone
QM/MM-PBSA
Halogen
HalogenHydrogen bond donor
Megjelenés:European Journal of Medicinal Chemistry. - 223 (2021), p. 1-14. -
További szerzők:Szabó Erna (1990-) (Biológus) Bocska Boglárka Sinh, Luu Thanh Fernandes, Conceicao Piedade Timári István (1989-) (vegyész) Hayes, Joseph M. Somsák László (1954-) (vegyész) Barna Teréz (1963-) (vegyész)
Pályázati támogatás:K 109450
OTKA
NKFIH FK125067
Egyéb
NKFIH PD 135034
Egyéb
GINOP-2.3.2-15-2016-00008
GINOP
GINOP-2.3.3-15-2016-00004
GINOP
Internet cím:Szerző által megadott URL
DOI
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2.

001-es BibID:BIBFORM072396
Első szerző:Kun Sándor (vegyész)
Cím:A multidisciplinary study of 3-(β-D-glucopyranosyl)-5-substituted-1,2,4-triazole derivatives as glycogen phosphorylase inhibitors : computation, synthesis, crystallography and kinetics reveal new potent inhibitors / Sandor Kun, Jaida Begum, Efthimios Kyriakis, Evgenia C. V. Stamati, Thomas A. Barkas, Eszter Szennyes, Eva Bokor, Katalin E. Szabo, George A. Stravodimos, Adam Sipos, Tibor Docsa, Pal Gergely, Colin Moffatt, Myrto S. Patraskaki, Maria C. Kokolaki, Alkistis Gkerdi, Vassiliki T. Skamnaki, Demetres D. Leonidas, Laszló Somsák, Joseph M. Hayes
Dátum:2018
ISSN:0223-5234
Megjegyzések:3-(β-D-Glucopyranosyl)-5-substituted-1,2,4-triazoles have been revealed as an effective scaffold for the development of potent glycogen phosphorylase (GP) inhibitors but with the potency very sensitive to the nature of the alkyl/aryl 5-substituent (Kun et al., Eur. J. Med. Chem. 2014, 76, 567). For a training set of these ligands, quantum mechanics-polarized ligand docking (QM-PLD) demonstrated good potential to identify larger differences in potencies (predictive index PI = 0.82) and potent inhibitors with Ki's < 10 ?M (AU-ROC = 0.86). Accordingly, in silico screening of 2335 new analogues exploiting the ZINC docking database was performed and nine predicted candidates selected for synthesis. The compounds were prepared in O-perbenzoylated forms by either ring transformation of 5-?-D-glucopyranosyl tetrazole by N-benzyl-arenecarboximidoyl chlorides, ring closure of C-(?-D-glucopyranosyl)formamidrazone with aroyl chlorides, or that of N-(?-D-glucopyranosylcarbonyl)arenethiocarboxamides by hydrazine, followed by deprotections. Kinetics experiments against rabbit muscle GPb (rmGPb) and human liver GPa (hlGPa) revealed five compounds as potent low ?M inhibitors with three of these on the submicromolar range for rmGPa. X-ray crystallographic analysis sourced the potency to a combination of favorable interactions from the 1,2,4-triazole and suitable aryl substituents in the GP catalytic site. The compounds also revealed promising calculated pharmacokinetic profiles.
Tárgyszavak:Orvostudományok Elméleti orvostudományok idegen nyelvű folyóiratközlemény külföldi lapban
1,2,4-Triazole
C-[beta]-D-glucopyranosyl derivatives
Glycogen phosphorylase inhibitors
QM/MM docking
Kinetics
X-ray crystallography
Megjelenés:European Journal of Medicinal Chemistry 147 (2018), p. 266-278. -
További szerzők:Begum, Jaida Kyriakis, Efthimios Stamati, Evgenia C. V. Barkas, Thomas A. Szennyes Eszter (1989-) (vegyész) Bokor Éva (1982-) (vegyész) Szabó Erzsébet Katalin (1989-) (vegyész) Stravodimos, George A. Sipos Ádám (1992-) (gyógyszerész) Docsa Tibor (1975-) (vegyész, biokémikus) Gergely Pál (1947-) (biokémikus) Moffatt, Colin Patraskaki, Myrto S. Kokolaki, Maria C. Gkerdi, Alkistis Skamnaki, Vassiliki T. Leonidas, Demetres D. Somsák László (1954-) (vegyész) Hayes, Joseph M.
Pályázati támogatás:PD 105808
OTKA
PD 121406
OTKA
GINOP-2.3.2-15-2016-00008
GINOP
Internet cím:Szerző által megadott URL
DOI
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