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001-es BibID:	BIBFORM119954
035-os BibID:	(cikkazonosító)7545
Első szerző:	Nagy Nikoletta Andrea (biológus)
Cím:	The updated genome of the Hungarian population of Aedes koreicus / Nikoletta Andrea Nagy, Gábor Endre Tóth, Kornélia Kurucz, Gábor Kemenesi, Levente Laczkó
Dátum:	2024
ISSN:	2045-2322
Megjegyzések:	Vector-borne diseases pose a potential risk to human and animal welfare, and understanding their spread requires genomic resources. The mosquito Aedes koreicus is an emerging vector that has been introduced into Europe more than 15 years ago but only a low quality, fragmented genome was available. In this study, we carried out additional sequencing and assembled and characterized the genome of the species to provide a background for understanding its evolution and biology. The updated genome was 1.1Gbp long and consisted of 6099 contigs with an N50 value of 329,610 bp and a BUSCO score of 84%. We identifed 22,580 genes that could be functionally annotated and paid particular attention to the identifcation of potential insecticide resistance genes. The assessment of the orthology of the genes indicates a high turnover at the terminal branches of the species tree of mosquitoes with complete genomes, which could contribute to the adaptation and evolutionary success of the species. These results could form the basis for numerous downstream analyzes to develop targets for the control of mosquito populations.
Tárgyszavak:	Orvostudományok Egészségtudományok idegen nyelvű folyóiratközlemény külföldi lapban folyóiratcikk Aedes Invasive mosquito Genome assembly Tird generation sequencing Hybrid assembly Functional annotation
Megjelenés:	Scientific Reports. - 14 : 1 (2024), p.1-12. -
További szerzők:	Tóth Gábor Endre Kurucz Kornélia Kemenesi Gábor Laczkó Levente (1992-) (biológus)
Pályázati támogatás:	PD142602 OTKA FK-138563 Egyéb RRF-2.3.1-21-2022-00010 Egyéb
Internet cím:	Szerző által megadott URL DOI Intézményi repozitóriumban (DEA) tárolt változat
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001-es BibID:	BIBFORM115523
035-os BibID:	(cikkazonosító)17800 (Scopus)85174462669
Első szerző:	Zinevich, Liudmila
Cím:	Phylogenomic insights into the polyphyletic nature of Altai falcons within eastern sakers (Falco cherrug) and the origins of gyrfalcons (Falco rusticolus) / Liudmila Zinevich, Mátyás Prommer, Levente Laczkó, Daria Rozhkova, Alexander Sorokin, Igor Karyakin, János Bagyura, Tamás Cserkész, Gábor Sramkó
Dátum:	2023
ISSN:	2045-2322
Megjegyzések:	The Altai falcon from Central Asia always attracted the attention of humans. Long considered a totemic bird in its native area, modern falconers still much appreciated this large-bodied and mighty bird of prey due to its rarity and unique look. The peculiar body characteristics halfway between the saker falcon (Falco cherrug) and the gyrfalcon (F. rusticolus) triggered debates about its contentious taxonomy. The weak phylogenetic signal associated with traditional genetic methods could not resolve this uncertainty. Here, we address the controversial evolutionary origin of Altai falcons by means of a genome-wide approach, Restriction-site Associated DNA sequencing, using sympatric eastern sakers falcons, allopatric western saker falcons and gyrfalcons as outgroup. This approach provided an unprecedented insight into the phylogenetic relationships of the studied populations by delivering 17,095 unlinked SNPs shedding light on the polyphyletic nature of Altai falcons within eastern sakers. Thus we concluded that the former must correspond to a low taxonomic rank, probably an ecotype or form of the latter. Also, we found that eastern sakers are paraphyletic without gyrfalcons, thus, these latter birds are best regarded as the direct sister lineage of the eastern sakers. This evolutionary relationship, corroborated also by re-analyzing the dataset with the inclusion of outgroup samples (F. biarmicus and F. peregrinus), put eastern sakers into a new light as the potential ancestral genetic source of high latitude and altitude adaptation in descendent populations. Finally, conservation genomic values hint at the stable genetic background of the studied saker populations.
Tárgyszavak:	Természettudományok Biológiai tudományok idegen nyelvű folyóiratközlemény külföldi lapban folyóiratcikk
Megjelenés:	Scientific Reports. - 13 : 1 (2023), p. 1-19. -
További szerzők:	Prommer Mátyás Laczkó Levente (1992-) (biológus) Rozhkova, Daria Sorokin, Alexander Karyakin, Igor Bagyura János Cserkész Tamás Sramkó Gábor (1981-) (biológus)
Pályázati támogatás:	FK137962 OTKA NKM 2020-6 Egyéb
Internet cím:	Szerző által megadott URL DOI Intézményi repozitóriumban (DEA) tárolt változat Adattár
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