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001-es BibID:	BIBFORM018139
Első szerző:	Kubicek, Christian P.
Cím:	Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma / Christian P Kubicek, Alfredo Herrera-Estrella, Verena Seidl-Seiboth, Diego A Martinez, Irina S Druzhinina, Michael Thon, Susanne Zeilinger, Sergio Casas-Flores, Benjamin A Horwitz, Prasun K Mukherjee, Mala Mukherjee, László Kredics, Luis D Alcaraz, Andrea Aerts, Zsuzsanna Antal, Lea Atanasova, Mayte G Cervantes-Badillo, Jean Challacombe, Olga Chertkov, Kevin McCluskey, Fanny Coulpier, Nandan Deshpande, Hans von Döhren, Daniel J Ebbole, Edgardo U Esquivel-Naranjo, Erzsébet Fekete, Michel Flipphi, Fabian Glaser, Elida Y Gómez-Rodríguez, Sabine Gruber, Cliff Han, Bernard Henrissat, Rosa Hermosa, Miguel Hernández-Oñate, Levente Karaffa, Idit Kosti, Stéphane Le Crom, Erika Lindquist, Susan Lucas, Mette Lübeck, Peter S Lübeck, Antoine Margeot, Benjamin Metz, Monica Misra, Helena Nevalainen, Markus Omann, Nicolle Packer, Giancarlo Perrone, Edith E Uresti-Rivera, Asaf Salamov, Monika Schmoll, Bernhard Seiboth, Harris Shapiro, Serenella Sukno, Juan Antonio Tamayo-Ramos, Doris Tisch, Aric Wiest, Heather H Wilkinson, Michael Zhang, Pedro M Coutinho, Charles M Kenerley, Enrique Monte, Scott E Baker, Igor V Grigoriev
Dátum:	2011
ISSN:	1474-760X
Megjegyzések:	Background Mycoparasitism, a lifestyle where one fungus is parasitic on another fungus, has special relevance when the prey is a plant pathogen, providing a strategy for biological control of pests for plant protection. Probably, the most studied biocontrol agents are species of the genus Hypocrea/Trichoderma. Results Here we report an analysis of the genome sequences of the two biocontrol species Trichoderma atroviride (teleomorph Hypocrea atroviridis) and Trichoderma virens (formerly Gliocladium virens, teleomorph Hypocrea virens), and a comparison with Trichoderma reesei (teleomorph Hypocrea jecorina). These three Trichoderma species display a remarkable conservation of gene order (78 to 96%), and a lack of active mobile elements probably due to repeat-induced point mutation. Several gene families are expanded in the two mycoparasitic species relative to T. reesei or other ascomycetes, and are overrepresented in non-syntenic genome regions. A phylogenetic analysis shows that T. reesei and T. virens are derived relative to T. atroviride. The mycoparasitism-specific genes thus arose in a common Trichoderma ancestor but were subsequently lost in T. reesei. Conclusions The data offer a better understanding of mycoparasitism, and thus enforce the development of improved biocontrol strains for efficient and environmentally friendly protection of plants.
Tárgyszavak:	Természettudományok Biológiai tudományok idegen nyelvű folyóiratközlemény külföldi lapban
Megjelenés:	Genome Biology. - 12 : 4 (2011), p. 1-15. -
További szerzők:	Herrera-Estrella, Alfredo Seidl-Seiboth, Verena Martinez, Diego A. Druzhinina, Irina S. Thon, Michael Zeilinger, Susanne Casas-Flores, Sergio Horwitz, Benjamin A. Mukherjee, Prasun K. Mukherjee, Mala Kredics László Alcaraz, Luis D. Aerts, Andrea Antal Zsuzsanna (Szeged) Atanasova, Lea Cervantes-Badillo, Mayte G. Challacombe, Jean Chertkov, Olga McCluskey, Kevin Coulpier, Fanny Deshpande, Nandan Döhren, Hans Von Ebbole, Daniel J. Esquivel-Naranjo, Edgardo U. Fekete Erzsébet (1975-) (biotechnológus, egyetemi tanár) Flipphi, Michel (1964-) Glaser, Fabian Gómez-Rodríguez, Elida Y Gruber, Sabine Han, Cliff Henrissat, Bernard Hermosa, Rosa Hernández-Oñate, Miguel Karaffa Levente (1971-) (biotechnológus, egyetemi tanár) Kosti, Idit Le Crom, Stéphane Lindquist, Erika Lucas, Susan Lübeck, Mette Lübeck, Peter S. Margeot, Antoine Metz, Benjamin Misra, Monica Nevalainen, Helena Omann, Markus Packer, Nicolle Perrone, Giancarlo Uresti-Rivera, Edith E. Salamov, Asaf Schmoll, Monika Seiboth, Bernhard Shapiro, Harris Sukno, Serenella Tamayo-Ramos, Juan Antonio Tisch, Doris Wiest, Aric Wilkinson, Heather H. Zhang, Michael Coutinho, Pedro M. Kenerley, Charles M. Monte, Enrique Baker, Scott E. Grigoriev, Igor V.
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001-es BibID:	BIBFORM018754
Első szerző:	Wortman, Jennifer Russo
Cím:	The 2008 update of the Aspergillus nidulans genome annotation : A community effort / Jennifer Russo Wortman, Jane Mabey Gilsenan, Vinita Joardar, Jennifer Deegan, John Clutterbuck, Mikael R. Andersen, David Archer, Mojca Bencina, Gerhard Braus, Pedro Coutinho, Hans von Döhren, John Doonan, Arnold J.M. Driessen, Pawel Durek, Eduardo Espeso, Erzsébet Fekete, Michel Flipphi, Carlos Garcia Estrada, Steven Geysens, Gustavo Goldman, Piet W.J. de Groot, Kim Hansen, Steven D. Harris, Thorsten Heinekamp, Kerstin Helmstaedt, Bernard Henrissat, Gerald Hofmann, Tim Homan, Tetsuya Horio, Hiroyuki Horiuchi, Steve James, Meriel Jones, Levente Karaffa, Zsolt Karányi, Masashi Kato, Nancy Keller, Diane E. Kelly, Jan A.K.W. Kiel, Jung-Mi Kim, Ida J. van der Klei, Frans M. Klis, Andriy Kovalchuk, Nada Kraševec, Christian P. Kubicek, Bo Liu, Andrew MacCabe, Vera Meyer, Pete Mirabito, Márton Miskei, Magdalena Mos, Jonathan Mullins, David R. Nelson, Jens Nielsen, Berl R. Oakley, Stephen A. Osmani, Tiina Pakula, Andrzej Paszewski, Ian Paulsen, Sebastian Pilsyk, István Pócsi, Peter J. Punt, F.J. Ram, Qinghu Ren, Xavier Robellet, Geoff Robson, Bernhard Seiboth, Piet van Solingen, Thomas Specht, Jibin Sun, Naimeh Taheri-Talesh, Norio Takeshita, Dave Ussery, Patricia A. van Kuyk, Hans Visser, Peter J.I. van de Vondervoort, Ronald P. de Vries, Jonathan Walton, Xin Xiang, Yi Xiong, An Ping Zeng, Bernd W. Brandt, Michael J. Cornell, Cees A.M.J.J. van den Hondely, Jacob Visser, Stephen G. Oliver, Geoffrey Turner
Dátum:	2009
ISSN:	1087-1845
Tárgyszavak:	Természettudományok Biológiai tudományok idegen nyelvű folyóiratközlemény külföldi lapban folyóiratcikk
Megjelenés:	Fungal Genetics And Biology. - 46 : 1 (2009), p. 2-13. -
További szerzők:	Gilsenan, Jane Mabey Joardar, Vinita Deegan, Jennifer Clutterbuck, John Andersen, Mikael R. Archer, David Bencina, Mojca Braus, Gerhard Coutinho, Pedro M. Döhren, Hans Von Doonan, John Driessen, Arnold J. M. Durek, Pawel Espeso, Eduardo Fekete Erzsébet (1975-) (biotechnológus, egyetemi tanár) Flipphi, Michel (1964-) Estrada, Carlos Garcia Geysens, Steven Goldman, Gustavo Groot, Piet W. J. de Hansen, Kim Harris, Steven D. Heinekamp, Thorsten Helmstaedt, Kerstin Henrissat, Bernard Hofmann, Gerald Homan, Tim Horio, Tetsuya Horiuchi, Hiroyuki James, Steve Jones, Meriel Karaffa Levente (1971-) (biotechnológus, egyetemi tanár) Karányi Zsolt (1961-) (biostatisztikus, bioinformatikus) Kato, Masashi Keller, Nancy Kelly, Diane E. Kiel, Jan A.K.W. Kim, Jung-Mi Klei, Ida J. van der Klis, Frans M. Kovalchuk, Andriy Kraševec, Nada Kubicek, Christian P. Liu, Bo MacCabe, Andrew Meyer, Vera Mirabito, Pete Miskei Márton (1978-) (molekuláris biológus, genetikus) Mos, Magdalena Mullins, Jonathan Nelson, David R. Nielsen, Jens Oakley, Berl R. Osmani, Stephen A. Pakula, Tiina Paszewski, Andrzej Paulsen, Ian Pilsyk, Sebastian Pócsi István (1961-) (vegyész) Punt, Peter J. Ram, Arthur F.J. Ren, Qinghu Robellet, Xavier Robson, Geoff Seiboth, Bernhard Solingen, Piet van Specht, Thomas Sun, Jibin Taheri-Talesh, Naimeh Takeshita, Norio Ussery, Dave Kuyk, Patricia A. van Visser, Hans Vondervoort, Peter J. I. van de De Vries, Ronald P. Walton, Jonathan Xiang, Xin Xiong, Yi Zeng, An Ping Brandt, Bernd W. Cornell, Michael J. Hondely, Cees A.M.J.J. van den Visser, Jacob Oliver, Stephen G. Turner, Geoffrey
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