Összesen 3 találat.


001-es BibID:BIBFORM105492
Első szerző:Ács-Szabó Lajos (biológus)
Cím:New Strain of Cyphellophora olivacea Exhibits Striking Tolerance to Sodium Bicarbonate / Lajos Acs-Szabo, Laszlo Attila Papp, Hajnalka Csoma, Ida Miklos, Matthias Sipiczki
Megjegyzések:The cyanobacterium strain Synechococcus cedrorum SAG 88.79 stock culture has fungal contamination stated by the Sammlung von Algenkulturen der Universität Göttingen itself. In this recent work, this particular fungal strain was isolated, identified, and morphologically characterised. The fungal strain AGSC12 belongs to the species Cyphellophora olivacea, with respect to the sequence similarity, phylogeny, and morphology of the strain. Colony morphology and growth capability were examined on SMA, EMMA, PDA, MEA, YEA, and YPA plates. Growth of the colonies was the most successful on YPA plates, followed by PDA and MEA containing plates. Surprisingly, the AGSC12 strain showed extreme tolerance to NaHCO3 , albeit it, is is considered a general fungistatic compound. Moreover, positive association between the AGSC12 and SAG 88.79 strains was revealed, as the SAG 88.79 strain always attained higher cell density in co-cultures with the fungus than in mono-cultures. Besides, a taxonomic note on the SAG 88.79 strain itself was also stated.
Tárgyszavak:Természettudományok Biológiai tudományok idegen nyelvű folyóiratközlemény külföldi lapban
fungal phylogeny
sodium bicarbonate
microbial interaction
Megjelenés:Diversity. - 14 : 12 (2022), p. 1023-. -
További szerzők:Papp László Attila (1986-) (genetikus) Csoma Hajnalka (1979-) (biológus, szőlész-borász) Miklós Ida (1962-) (biológus) Sipiczki Mátyás (1948-) (biológus)
Pályázati támogatás:K-124417
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001-es BibID:BIBFORM078528
035-os BibID:(cikkazonosító)foy021
Első szerző:Csoma Hajnalka (biológus, szőlész-borász)
Cím:Application of different markers and data-analysis tools to the examination of biodiversity can lead to different results : a case study with Starmerella bacillaris (synonym Candida zemplinina) strains / Hajalka Csoma, Lajos Ács-Szabó, László Attila Papp, Matthias Sipiczki
Megjegyzések:Starmerella bacillaris (Candida zemplinina) is a genetically heterogeneous species. In this work, the diversity of 41 strains of various origins is examined and compared by the analysis of the length polymorphism of nuclear microsatellites and the RFLP of mitochondrial genomes. The band patterns are analysed with UPGMA, neighbor joining, neighbor net, minimum spanning tree and non-metric MDS algorithms. The results and their comparison to previous analyses demonstrate that different markers and different clustering methods can result in very different groupings of the same strains. The observed differences between the topologies of the dendrograms also indicate that the positions of the strains do not necessarily reflect their real genetic relationships and origins. The possibilities that the differences might be partially due to different sensitivity of the markers to environmental factors (selection pressure) and partially to the different grouping criteria of the algorithms are also discussed.
Tárgyszavak:Természettudományok Biológiai tudományok idegen nyelvű folyóiratközlemény külföldi lapban
Candida zemplinina
microsatellite markers
strain biodiversity
Megjelenés:FEMS Yeast Research. - 18 : 5 (2018), p. 1-12. -
További szerzők:Ács-Szabó Lajos (1985-) (biológus) Papp László Attila (1986-) (genetikus) Sipiczki Mátyás (1948-) (biológus)
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001-es BibID:BIBFORM102137
Első szerző:Plaszkó Tamás (Biológus Msc)
Cím:Correlations between the metabolome and the endophytic fungal metagenome suggests importance of various metabolite classes in community assembly in horseradish (Armoracia rusticana L., Brassicaceae) roots / Plaszkó Tamás, Szűcs Zsolt, Cziáky Zoltán, Ács-Szabó Lajos, Csoma Hajnalka, Géczi László, Vasas Gábor, Gonda Sándor
Megjegyzések:The plant microbiome is an increasingly intensive research area, with significance in agriculture, general plant health, and production of bioactive natural products. Correlations between the fungal endophytic communities and plant chemistry can provide insight into these interactions, and suggest key contributors on both the chemistry and fungal side. In this study, roots of various horseradish (Armoracia rusticana L.) accessions grown under the same conditions were sampled in two consecutive years and chemically characterized using a quality controlled, untargeted metabolomics approach by LC-ESI-MS/MS. Sinigrin, gluconasturtiin, glucoiberin and glucobrassicin were also quantified. Thereafter, a subset of roots from 8 accessions (n = 64) with considerable chemical variability was assessed for their endophytic fungal community, using an ITS2 amplicon-based metagenomic approach using a custom primer with high coverage on fungi, but no amplification of host ITS. A set of 335 chemical features, including putatively identified flavonoids, phospholipids, peptides, amino acid derivatives, indolic phytoalexins, a glucosinolate and a glucosinolate downstream product was detected. Major taxa in horseradish roots belonged to Cantharellales, Glomerellales, Hypocreales, Pleosporales, Saccharomycetales and Sordariales. Most abundant genera included typical endophytes such as Plectosphaerella, Thanatephorus, Podospora, Monosporascus, Exophiala and Setophoma. A surprising dominance of single taxa was observed for many samples. In summary, 35.23% of reads of the plant endophytic fungal microbiome correlated with changes in the plant metabolome. While the concentration of flavonoid kaempferol glycosides positively correlated with the abundance of many fungal strains, many compounds showed negative correlations with fungi including indolic phytoalexins, a putative glucosinolate but not major glucosinolates and a glutathione isothiocyanate adduct. The latter is likely an in vivo glucosinolate decomposition product important in fungal arrest. Our results show the potency of the untargeted metabolomics approach in deciphering plant - microbe interactions and depicts a complex array of various metabolite classes in shaping the endophytic fungal community.
Tárgyszavak:Természettudományok Biológiai tudományok idegen nyelvű folyóiratközlemény külföldi lapban
plant microbiome
plant holobiont
fungal endophytes
glucosinolate decomposition
flavonoid glycosides
tryptophan derivatives
Megjelenés:Frontiers in Plant Science. - "Accepted by Publisher" : - (2022), p. 1-34. -
További szerzők:Szűcs Zsolt (1990-) (gyógyszerész) Cziáky Zoltán Ács-Szabó Lajos (1985-) (biológus) Csoma Hajnalka (1979-) (biológus, szőlész-borász) Géczi László Vasas Gábor (1975-) (biológus-vegyész) Gonda Sándor (1984-) (gyógyszerész)
Pályázati támogatás:OTKA 128021
Internet cím:Intézményi repozitóriumban (DEA) tárolt változat
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