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001-es BibID:BIBFORM102137
Első szerző:Plaszkó Tamás (Biológus Msc)
Cím:Correlations between the metabolome and the endophytic fungal metagenome suggests importance of various metabolite classes in community assembly in horseradish (Armoracia rusticana L., Brassicaceae) roots / Plaszkó Tamás, Szűcs Zsolt, Cziáky Zoltán, Ács-Szabó Lajos, Csoma Hajnalka, Géczi László, Vasas Gábor, Gonda Sándor
Dátum:2022
ISSN:1664-462X
Megjegyzések:The plant microbiome is an increasingly intensive research area, with significance in agriculture, general plant health, and production of bioactive natural products. Correlations between the fungal endophytic communities and plant chemistry can provide insight into these interactions, and suggest key contributors on both the chemistry and fungal side. In this study, roots of various horseradish (Armoracia rusticana L.) accessions grown under the same conditions were sampled in two consecutive years and chemically characterized using a quality controlled, untargeted metabolomics approach by LC-ESI-MS/MS. Sinigrin, gluconasturtiin, glucoiberin and glucobrassicin were also quantified. Thereafter, a subset of roots from 8 accessions (n = 64) with considerable chemical variability was assessed for their endophytic fungal community, using an ITS2 amplicon-based metagenomic approach using a custom primer with high coverage on fungi, but no amplification of host ITS. A set of 335 chemical features, including putatively identified flavonoids, phospholipids, peptides, amino acid derivatives, indolic phytoalexins, a glucosinolate and a glucosinolate downstream product was detected. Major taxa in horseradish roots belonged to Cantharellales, Glomerellales, Hypocreales, Pleosporales, Saccharomycetales and Sordariales. Most abundant genera included typical endophytes such as Plectosphaerella, Thanatephorus, Podospora, Monosporascus, Exophiala and Setophoma. A surprising dominance of single taxa was observed for many samples. In summary, 35.23% of reads of the plant endophytic fungal microbiome correlated with changes in the plant metabolome. While the concentration of flavonoid kaempferol glycosides positively correlated with the abundance of many fungal strains, many compounds showed negative correlations with fungi including indolic phytoalexins, a putative glucosinolate but not major glucosinolates and a glutathione isothiocyanate adduct. The latter is likely an in vivo glucosinolate decomposition product important in fungal arrest. Our results show the potency of the untargeted metabolomics approach in deciphering plant - microbe interactions and depicts a complex array of various metabolite classes in shaping the endophytic fungal community.
Tárgyszavak:Természettudományok Biológiai tudományok idegen nyelvű folyóiratközlemény külföldi lapban
folyóiratcikk
plant microbiome
plant holobiont
fungal endophytes
glucosinolate decomposition
flavonoid glycosides
tryptophan derivatives
Megjelenés:Frontiers in Plant Science. - "Accepted by Publisher" : - (2022), p. 1-34. -
További szerzők:Szűcs Zsolt (1990-) (gyógyszerész) Cziáky Zoltán Ács-Szabó Lajos (1985-) (biológus) Csoma Hajnalka (1979-) (biológus) Géczi László Vasas Gábor (1975-) (biológus-vegyész) Gonda Sándor (1984-) (gyógyszerész)
Pályázati támogatás:OTKA 128021
OTKA
EFOP-3.6.1-16-2016-00022
EFOP
Internet cím:Intézményi repozitóriumban (DEA) tárolt változat
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